Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
ACTN4O43707 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.27■□□□□ 0.84
ACTN4O43707 SLC25A3P1-201ENST00000443844 931 ntBASIC20.27■□□□□ 0.84
ACTN4O43707 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ACTN4O43707 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.27■□□□□ 0.84
ACTN4O43707 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ACTN4O43707 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 LTB4R2-202ENST00000528054 3092 ntBASIC20.27■□□□□ 0.84
ACTN4O43707 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN4O43707 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN4O43707 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN4O43707 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN4O43707 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN4O43707 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN4O43707 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
ACTN4O43707 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN4O43707 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN4O43707 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN4O43707 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ACTN4O43707 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN4O43707 AC010203.1-204ENST00000548782 407 ntBASIC20.26■□□□□ 0.83
ACTN4O43707 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN4O43707 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.26■□□□□ 0.83
ACTN4O43707 AL023973.1-201ENST00000624619 620 ntBASIC20.26■□□□□ 0.83
ACTN4O43707 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.26■□□□□ 0.83
ACTN4O43707 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN4O43707 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN4O43707 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN4O43707 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN4O43707 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.25■□□□□ 0.83
ACTN4O43707 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN4O43707 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTN4O43707 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN4O43707 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ACTN4O43707 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTN4O43707 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ACTN4O43707 AC079602.3-201ENST00000623931 403 ntBASIC20.25■□□□□ 0.83
ACTN4O43707 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTN4O43707 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ACTN4O43707 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN4O43707 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN4O43707 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
ACTN4O43707 LINC00602-201ENST00000629776 2065 ntBASIC20.25■□□□□ 0.83
ACTN4O43707 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN4O43707 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.25■□□□□ 0.83
ACTN4O43707 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 AL645608.8-201ENST00000606034 2086 ntBASIC20.24■□□□□ 0.83
ACTN4O43707 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ACTN4O43707 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ACTN4O43707 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.24■□□□□ 0.83
ACTN4O43707 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.24■□□□□ 0.83
ACTN4O43707 AC079416.2-201ENST00000625035 1193 ntBASIC20.24■□□□□ 0.83
ACTN4O43707 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ACTN4O43707 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.24■□□□□ 0.83
ACTN4O43707 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.24■□□□□ 0.83
ACTN4O43707 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.24■□□□□ 0.83
ACTN4O43707 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
ACTN4O43707 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ACTN4O43707 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ACTN4O43707 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.24■□□□□ 0.83
ACTN4O43707 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.24■□□□□ 0.83
ACTN4O43707 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ACTN4O43707 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN4O43707 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.23■□□□□ 0.83
ACTN4O43707 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms