Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
XRCC2O43543 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 AC113347.1-201ENST00000413321 391 ntBASIC15.72■□□□□ 0.11
XRCC2O43543 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
XRCC2O43543 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
XRCC2O43543 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.72■□□□□ 0.11
XRCC2O43543 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.72■□□□□ 0.11
XRCC2O43543 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 AL157888.1-201ENST00000631930 593 ntBASIC15.72■□□□□ 0.11
XRCC2O43543 AC097493.4-201ENST00000641197 219 ntBASIC15.72■□□□□ 0.11
XRCC2O43543 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
XRCC2O43543 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.72■□□□□ 0.11
XRCC2O43543 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.72■□□□□ 0.11
XRCC2O43543 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
XRCC2O43543 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
XRCC2O43543 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC2O43543 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
XRCC2O43543 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.71■□□□□ 0.11
XRCC2O43543 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC2O43543 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.71■□□□□ 0.11
XRCC2O43543 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
XRCC2O43543 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
XRCC2O43543 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC2O43543 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
XRCC2O43543 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.71■□□□□ 0.11
XRCC2O43543 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.71■□□□□ 0.11
XRCC2O43543 AL137013.1-201ENST00000432946 1228 ntBASIC15.71■□□□□ 0.11
XRCC2O43543 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.71■□□□□ 0.11
XRCC2O43543 COX11P1-201ENST00000489116 835 ntBASIC15.71■□□□□ 0.11
XRCC2O43543 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.71■□□□□ 0.11
XRCC2O43543 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
XRCC2O43543 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.71■□□□□ 0.11
XRCC2O43543 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 GCSHP2-201ENST00000560971 527 ntBASIC15.71■□□□□ 0.11
XRCC2O43543 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.71■□□□□ 0.11
XRCC2O43543 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC2O43543 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.71■□□□□ 0.11
XRCC2O43543 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
XRCC2O43543 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.71■□□□□ 0.11
XRCC2O43543 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
XRCC2O43543 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
XRCC2O43543 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
XRCC2O43543 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC2O43543 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
XRCC2O43543 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
XRCC2O43543 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
XRCC2O43543 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
XRCC2O43543 AC067852.2-201ENST00000590513 2313 ntBASIC15.71■□□□□ 0.1
XRCC2O43543 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.71■□□□□ 0.1
XRCC2O43543 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.71■□□□□ 0.1
XRCC2O43543 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
XRCC2O43543 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms