Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 DUTP2-201ENST00000519164 463 ntBASIC18.62■□□□□ 0.57
COCHO43405 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
COCHO43405 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
COCHO43405 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.62■□□□□ 0.57
COCHO43405 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COCHO43405 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COCHO43405 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.62■□□□□ 0.57
COCHO43405 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.62■□□□□ 0.57
COCHO43405 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
COCHO43405 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.61■□□□□ 0.57
COCHO43405 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COCHO43405 KRT8P47-201ENST00000604727 1398 ntBASIC18.61■□□□□ 0.57
COCHO43405 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COCHO43405 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
COCHO43405 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.61■□□□□ 0.57
COCHO43405 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.61■□□□□ 0.57
COCHO43405 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
COCHO43405 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.61■□□□□ 0.57
COCHO43405 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.61■□□□□ 0.57
COCHO43405 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.61■□□□□ 0.57
COCHO43405 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.61■□□□□ 0.57
COCHO43405 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.61■□□□□ 0.57
COCHO43405 TP73-AS1-207ENST00000624167 988 ntBASIC18.61■□□□□ 0.57
COCHO43405 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COCHO43405 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.61■□□□□ 0.57
COCHO43405 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COCHO43405 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
COCHO43405 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COCHO43405 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.6■□□□□ 0.57
COCHO43405 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.6■□□□□ 0.57
COCHO43405 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
COCHO43405 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.6■□□□□ 0.57
COCHO43405 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COCHO43405 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COCHO43405 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 MRPL3P1-201ENST00000400109 1033 ntBASIC18.6■□□□□ 0.57
COCHO43405 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.6■□□□□ 0.57
COCHO43405 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.6■□□□□ 0.57
COCHO43405 SLC25A6P4-201ENST00000586535 553 ntBASIC18.6■□□□□ 0.57
COCHO43405 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.6■□□□□ 0.57
COCHO43405 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.6■□□□□ 0.57
COCHO43405 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COCHO43405 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.6■□□□□ 0.57
COCHO43405 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
COCHO43405 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.6■□□□□ 0.57
COCHO43405 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COCHO43405 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COCHO43405 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.59■□□□□ 0.57
COCHO43405 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.59■□□□□ 0.57
COCHO43405 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COCHO43405 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.59■□□□□ 0.57
COCHO43405 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COCHO43405 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
COCHO43405 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.59■□□□□ 0.57
COCHO43405 AC106795.1-205ENST00000512851 1056 ntBASIC18.59■□□□□ 0.57
COCHO43405 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.59■□□□□ 0.57
COCHO43405 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.59■□□□□ 0.57
COCHO43405 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms