Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH17O14917 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH17O14917 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDH17O14917 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH17O14917 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
PCDH17O14917 ATP5G2P1-201ENST00000433580 426 ntBASIC17.26■□□□□ 0.35
PCDH17O14917 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.26■□□□□ 0.35
PCDH17O14917 AC079602.3-201ENST00000623931 403 ntBASIC17.26■□□□□ 0.35
PCDH17O14917 AC112777.1-201ENST00000540175 1423 ntBASIC17.26■□□□□ 0.35
PCDH17O14917 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDH17O14917 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH17O14917 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCDH17O14917 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDH17O14917 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 AC008764.6-201ENST00000595909 2069 ntBASIC17.25■□□□□ 0.35
PCDH17O14917 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH17O14917 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH17O14917 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDH17O14917 BX276092.5-203ENST00000456199 560 ntBASIC17.25■□□□□ 0.35
PCDH17O14917 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH17O14917 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH17O14917 KRT8P26-201ENST00000534154 1276 ntBASIC17.25■□□□□ 0.35
PCDH17O14917 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH17O14917 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH17O14917 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH17O14917 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH17O14917 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH17O14917 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH17O14917 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH17O14917 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH17O14917 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDH17O14917 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH17O14917 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH17O14917 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH17O14917 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH17O14917 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH17O14917 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH17O14917 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDH17O14917 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDH17O14917 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH17O14917 KRT8P50-201ENST00000562022 1438 ntBASIC17.24■□□□□ 0.35
PCDH17O14917 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PCDH17O14917 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH17O14917 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH17O14917 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH17O14917 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDH17O14917 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH17O14917 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH17O14917 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDH17O14917 AL121894.2-201ENST00000602977 491 ntBASIC17.24■□□□□ 0.35
PCDH17O14917 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH17O14917 AC020916.1-201ENST00000587762 1774 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms