Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RTCAO00442 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.25■□□□□ 0.35
RTCAO00442 LINC01311-201ENST00000565162 1445 ntBASIC17.25■□□□□ 0.35
RTCAO00442 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.25■□□□□ 0.35
RTCAO00442 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.25■□□□□ 0.35
RTCAO00442 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.25■□□□□ 0.35
RTCAO00442 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.25■□□□□ 0.35
RTCAO00442 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.25■□□□□ 0.35
RTCAO00442 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.25■□□□□ 0.35
RTCAO00442 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RTCAO00442 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.25■□□□□ 0.35
RTCAO00442 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.25■□□□□ 0.35
RTCAO00442 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
RTCAO00442 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 FLJ13224-201ENST00000313737 1514 ntBASIC17.25■□□□□ 0.35
RTCAO00442 AC008764.6-201ENST00000595909 2069 ntBASIC17.25■□□□□ 0.35
RTCAO00442 NOC2LP2-201ENST00000407594 1944 ntBASIC17.25■□□□□ 0.35
RTCAO00442 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RTCAO00442 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 LINC00167-201ENST00000530583 1419 ntBASIC17.24■□□□□ 0.35
RTCAO00442 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTCAO00442 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RTCAO00442 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RTCAO00442 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.24■□□□□ 0.35
RTCAO00442 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 AC083849.1-201ENST00000615227 514 ntBASIC17.24■□□□□ 0.35
RTCAO00442 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.24■□□□□ 0.35
RTCAO00442 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.24■□□□□ 0.35
RTCAO00442 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RTCAO00442 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.24■□□□□ 0.35
RTCAO00442 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTCAO00442 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RTCAO00442 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.23■□□□□ 0.35
RTCAO00442 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RTCAO00442 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RTCAO00442 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.23■□□□□ 0.35
RTCAO00442 KRT18P48-201ENST00000434763 852 ntBASIC17.23■□□□□ 0.35
RTCAO00442 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.23■□□□□ 0.35
RTCAO00442 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.23■□□□□ 0.35
RTCAO00442 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 SPDYE13P-201ENST00000445314 798 ntBASIC17.23■□□□□ 0.35
RTCAO00442 AL671277.2-201ENST00000458060 996 ntBASIC17.23■□□□□ 0.35
RTCAO00442 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.23■□□□□ 0.35
RTCAO00442 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.23■□□□□ 0.35
RTCAO00442 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.23■□□□□ 0.35
RTCAO00442 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.23■□□□□ 0.35
RTCAO00442 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.23■□□□□ 0.35
RTCAO00442 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTCAO00442 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.23■□□□□ 0.35
RTCAO00442 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.23■□□□□ 0.35
RTCAO00442 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.23■□□□□ 0.35
RTCAO00442 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RTCAO00442 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTCAO00442 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTCAO00442 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms