Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 AC100803.2-201ENST00000562459 1963 ntBASIC15.99■□□□□ 0.15
NPIPB4C9JG80 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 KRT18P57-201ENST00000443599 1254 ntBASIC15.99■□□□□ 0.15
NPIPB4C9JG80 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 AC092597.1-201ENST00000487352 616 ntBASIC15.99■□□□□ 0.15
NPIPB4C9JG80 AP003733.1-201ENST00000491725 852 ntBASIC15.99■□□□□ 0.15
NPIPB4C9JG80 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 AC004263.2-201ENST00000617183 678 ntBASIC15.99■□□□□ 0.15
NPIPB4C9JG80 HYMAI.1-201ENST00000620949 238 ntBASIC15.99■□□□□ 0.15
NPIPB4C9JG80 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPB4C9JG80 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 AC012317.2-201ENST00000623305 2251 ntBASIC15.98■□□□□ 0.15
NPIPB4C9JG80 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 TSPY12P-201ENST00000421279 868 ntBASIC15.98■□□□□ 0.15
NPIPB4C9JG80 KRT18P38-201ENST00000449496 1282 ntBASIC15.98■□□□□ 0.15
NPIPB4C9JG80 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 AC063952.2-201ENST00000498792 1227 ntBASIC15.98■□□□□ 0.15
NPIPB4C9JG80 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 ZNF444P1-201ENST00000559497 298 ntBASIC15.98■□□□□ 0.15
NPIPB4C9JG80 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 GPR32P1-201ENST00000601788 811 ntBASIC15.98■□□□□ 0.15
NPIPB4C9JG80 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB4C9JG80 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 AC092647.4-201ENST00000457211 535 ntBASIC15.97■□□□□ 0.15
NPIPB4C9JG80 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 LINC01238-205ENST00000567549 1107 ntBASIC15.97■□□□□ 0.15
NPIPB4C9JG80 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 AC133963.1-201ENST00000504166 1679 ntBASIC15.97■□□□□ 0.15
NPIPB4C9JG80 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB4C9JG80 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB4C9JG80 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPB4C9JG80 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB4C9JG80 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPB4C9JG80 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPB4C9JG80 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms