Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 CKBP1-201ENST00000565489 1086 ntBASIC12.75□□□□□ -0.37
LINC01546A6NGU7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 REXO1L11P-201ENST00000620964 1927 ntBASIC12.75□□□□□ -0.37
LINC01546A6NGU7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AC005915.1-201ENST00000624912 2018 ntBASIC12.74□□□□□ -0.37
LINC01546A6NGU7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AC091874.3-201ENST00000512672 1195 ntBASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AF201337.1-201ENST00000520239 748 ntBASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AC008687.6-201ENST00000596318 630 ntBASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AL445675.2-201ENST00000620291 557 ntBASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AC092068.3-201ENST00000587894 2016 ntBASIC12.74□□□□□ -0.37
LINC01546A6NGU7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC01546A6NGU7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 AC022898.2-201ENST00000616822 1312 ntBASIC12.73□□□□□ -0.37
LINC01546A6NGU7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 AC060766.5-201ENST00000590539 871 ntBASIC12.73□□□□□ -0.37
LINC01546A6NGU7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 AC007950.2-201ENST00000615045 2347 ntBASIC12.73□□□□□ -0.37
LINC01546A6NGU7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01546A6NGU7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms