Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 DDX43P3-201ENST00000441064 443 ntBASIC26.6■■□□□ 1.85
HFM1A2PYH4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
HFM1A2PYH4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
HFM1A2PYH4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 AC009078.2-202ENST00000463353 338 ntBASIC26.59■■□□□ 1.85
HFM1A2PYH4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 AL355877.3-201ENST00000622820 899 ntBASIC26.59■■□□□ 1.85
HFM1A2PYH4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC26.59■■□□□ 1.85
HFM1A2PYH4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HFM1A2PYH4 AC138028.4-201ENST00000564984 1845 ntBASIC26.59■■□□□ 1.85
HFM1A2PYH4 AC009949.1-201ENST00000623048 1830 ntBASIC26.59■■□□□ 1.85
HFM1A2PYH4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
HFM1A2PYH4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
HFM1A2PYH4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
HFM1A2PYH4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC26.58■■□□□ 1.85
HFM1A2PYH4 AC008608.2-201ENST00000606089 416 ntBASIC26.58■■□□□ 1.85
HFM1A2PYH4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
HFM1A2PYH4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
HFM1A2PYH4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC26.58■■□□□ 1.85
HFM1A2PYH4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
HFM1A2PYH4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
HFM1A2PYH4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC26.58■■□□□ 1.85
HFM1A2PYH4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC26.58■■□□□ 1.85
HFM1A2PYH4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
HFM1A2PYH4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
HFM1A2PYH4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
HFM1A2PYH4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC26.57■■□□□ 1.84
HFM1A2PYH4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 AL160237.2-201ENST00000556165 472 ntBASIC26.57■■□□□ 1.84
HFM1A2PYH4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC26.57■■□□□ 1.84
HFM1A2PYH4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC26.57■■□□□ 1.84
HFM1A2PYH4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
HFM1A2PYH4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC26.57■■□□□ 1.84
HFM1A2PYH4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC26.57■■□□□ 1.84
HFM1A2PYH4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HFM1A2PYH4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms