Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 KRT18P23-201ENST00000435622 1283 ntBASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 UBE2SP1-201ENST00000450587 669 ntBASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC142381.4-202ENST00000563973 229 ntBASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC233702.5-201ENST00000584107 538 ntBASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV6-7A0A0A0MS04 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL355355.2-201ENST00000442321 338 ntBASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 WWOX-216ENST00000569818 525 ntBASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL049637.2-201ENST00000641778 930 ntBASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 KRT18P55-202ENST00000578578 1546 ntBASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV6-7A0A0A0MS04 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-7A0A0A0MS04 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms