Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC004870.1-201ENST00000315132 882 ntBASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 KRT18P1-202ENST00000452408 1331 ntBASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA6Q9Y5G7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 PVRIG2P-201ENST00000435460 978 ntBASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA6Q9Y5G7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 TPSP2-201ENST00000561760 610 ntBASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 RNF126P1-202ENST00000569893 925 ntBASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 AC034236.2-201ENST00000606662 1610 ntBASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 FZD10-202ENST00000539839 3282 ntBASIC17.43■□□□□ 0.38
PCDHGA6Q9Y5G7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA6Q9Y5G7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms