Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AL353801.3-201ENST00000609898 542 ntBASIC17.72■□□□□ 0.43
SATB2Q9UPW6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 HOXB1-202ENST00000577092 1414 ntBASIC17.72■□□□□ 0.43
SATB2Q9UPW6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SATB2Q9UPW6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 MRPL3P1-201ENST00000400109 1033 ntBASIC17.71■□□□□ 0.43
SATB2Q9UPW6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 AC020763.4-201ENST00000623414 4170 ntBASIC17.71■□□□□ 0.43
SATB2Q9UPW6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.71■□□□□ 0.43
SATB2Q9UPW6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.71■□□□□ 0.42
SATB2Q9UPW6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 AC006333.2-201ENST00000607957 2099 ntBASIC17.7■□□□□ 0.42
SATB2Q9UPW6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 GPR32P1-201ENST00000601788 811 ntBASIC17.7■□□□□ 0.42
SATB2Q9UPW6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SATB2Q9UPW6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms