Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC3Q9UN70 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC3Q9UN70 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC3Q9UN70 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC3Q9UN70 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDHGC3Q9UN70 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC3Q9UN70 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC3Q9UN70 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 TSPY12P-201ENST00000421279 868 ntBASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 AL121956.5-201ENST00000625261 221 ntBASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PCDHGC3Q9UN70 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 Z83836.1-201ENST00000624605 1642 ntBASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 AC006116.8-202ENST00000587620 1550 ntBASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 AC100803.2-201ENST00000562459 1963 ntBASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 AL590326.2-201ENST00000625139 305 ntBASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC3Q9UN70 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGC3Q9UN70 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGC3Q9UN70 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms