Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 AC099343.3-201ENST00000605834 2503 ntBASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 FAM86EP-206ENST00000510506 987 ntBASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SDHAF3Q9NRP4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 AC106820.2-201ENST00000563775 3264 ntBASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 IGHGP-201ENST00000390555 1178 ntBASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 PCED1CP-201ENST00000419887 785 ntBASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 AC091076.1-201ENST00000610741 619 ntBASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHAF3Q9NRP4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 AC104581.1-202ENST00000635932 2618 ntBASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 AC005332.3-201ENST00000589904 676 ntBASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 AC011498.5-201ENST00000592027 486 ntBASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 AP000550.4-202ENST00000639755 178 ntBASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 AC005332.1-201ENST00000577698 1310 ntBASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 IER3-202ENST00000376377 1350 ntBASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
SDHAF3Q9NRP4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms