Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 GCSHP5-201ENST00000443090 522 ntBASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 AP001412.1-201ENST00000608405 714 ntBASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 AC011506.1-201ENST00000474329 610 ntBASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 CA15P1-201ENST00000481698 905 ntBASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 AC135776.1-201ENST00000319817 2481 ntBASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 GMCL1P1-201ENST00000463439 1581 ntBASIC15.75■□□□□ 0.11
PCDHB16Q9NRJ7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 AC093677.2-201ENST00000600169 1863 ntBASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 AC096733.2-201ENST00000609937 1394 ntBASIC15.74■□□□□ 0.11
PCDHB16Q9NRJ7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB16Q9NRJ7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms