Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 AC005332.8-201ENST00000622750 2735 ntBASIC15.83■□□□□ 0.13
CDH20Q9HBT6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH20Q9HBT6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 ARMC10P1-201ENST00000313754 855 ntBASIC15.83■□□□□ 0.12
CDH20Q9HBT6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 HLA-F-220ENST00000434407 884 ntBASIC15.83■□□□□ 0.12
CDH20Q9HBT6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH20Q9HBT6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 KRT18P35-201ENST00000510488 1269 ntBASIC15.82■□□□□ 0.12
CDH20Q9HBT6 AC083849.1-201ENST00000615227 514 ntBASIC15.82■□□□□ 0.12
CDH20Q9HBT6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 OR6D1P-203ENST00000641209 4860 ntBASIC15.82■□□□□ 0.12
CDH20Q9HBT6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 ESPNP-201ENST00000270691 2015 ntBASIC15.82■□□□□ 0.12
CDH20Q9HBT6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH20Q9HBT6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 VENTXP5-201ENST00000523979 775 ntBASIC15.81■□□□□ 0.12
CDH20Q9HBT6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 AL024508.2-201ENST00000607749 1894 ntBASIC15.81■□□□□ 0.12
CDH20Q9HBT6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 HYMAI.1-201ENST00000620949 238 ntBASIC15.81■□□□□ 0.12
CDH20Q9HBT6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 AL121956.5-201ENST00000625261 221 ntBASIC15.81■□□□□ 0.12
CDH20Q9HBT6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDH20Q9HBT6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms