Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 SEC1P-202ENST00000473944 940 ntBASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 FZD10-202ENST00000539839 3282 ntBASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 CYP2D8P-201ENST00000433633 1490 ntBASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 KRT8P9-201ENST00000558927 1449 ntBASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 AC009947.2-201ENST00000444014 672 ntBASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 AC024243.1-201ENST00000609234 778 ntBASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 PKD1P1-201ENST00000458669 6805 ntBASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRTM1Q9HBL6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 TSPY15P-201ENST00000457163 923 ntBASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 NAPSB-206ENST00000562112 1266 ntBASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 MIR4497-201ENST00000583208 89 ntBASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 AC010947.1-201ENST00000623454 693 ntBASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 AC020916.1-201ENST00000587762 1774 ntBASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRTM1Q9HBL6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LRTM1Q9HBL6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.39■□□□□ 0.38
LRTM1Q9HBL6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 AL596275.1-201ENST00000423464 877 ntBASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms