Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
USP29Q9HBJ7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.58
USP29Q9HBJ7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
USP29Q9HBJ7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.64■□□□□ 0.57
USP29Q9HBJ7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 MIR3917-201ENST00000580971 93 ntBASIC18.64■□□□□ 0.57
USP29Q9HBJ7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 KRT18P55-202ENST00000578578 1546 ntBASIC18.64■□□□□ 0.57
USP29Q9HBJ7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP29Q9HBJ7 AC006116.8-202ENST00000587620 1550 ntBASIC18.64■□□□□ 0.57
USP29Q9HBJ7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 PCED1CP-201ENST00000419887 785 ntBASIC18.63■□□□□ 0.57
USP29Q9HBJ7 AL671277.2-201ENST00000458060 996 ntBASIC18.63■□□□□ 0.57
USP29Q9HBJ7 FAM86EP-206ENST00000510506 987 ntBASIC18.63■□□□□ 0.57
USP29Q9HBJ7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 AC132938.6-201ENST00000623828 1655 ntBASIC18.63■□□□□ 0.57
USP29Q9HBJ7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP29Q9HBJ7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.62■□□□□ 0.57
USP29Q9HBJ7 IER3-202ENST00000376377 1350 ntBASIC18.62■□□□□ 0.57
USP29Q9HBJ7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms