Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 BX664615.1-201ENST00000443558 458 ntBASIC17.31■□□□□ 0.36
BRF2Q9HAW0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 AC024563.2-201ENST00000603282 481 ntBASIC17.31■□□□□ 0.36
BRF2Q9HAW0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 TERF1P1-201ENST00000311003 1181 ntBASIC17.3■□□□□ 0.36
BRF2Q9HAW0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 AL137013.1-201ENST00000432946 1228 ntBASIC17.3■□□□□ 0.36
BRF2Q9HAW0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 AL441883.1-201ENST00000566170 1045 ntBASIC17.3■□□□□ 0.36
BRF2Q9HAW0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 LINC00896-202ENST00000609602 2128 ntBASIC17.3■□□□□ 0.36
BRF2Q9HAW0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRF2Q9HAW0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 STARP1-201ENST00000397973 869 ntBASIC17.29■□□□□ 0.36
BRF2Q9HAW0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.29■□□□□ 0.36
BRF2Q9HAW0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 AL136038.4-201ENST00000603606 1261 ntBASIC17.29■□□□□ 0.36
BRF2Q9HAW0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 AL391807.1-203ENST00000604392 2365 ntBASIC17.29■□□□□ 0.36
BRF2Q9HAW0 AC073508.3-201ENST00000619697 1419 ntBASIC17.29■□□□□ 0.36
BRF2Q9HAW0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRF2Q9HAW0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRF2Q9HAW0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms