Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 RN7SL850P-201ENST00000579959 291 ntBASIC19.3■□□□□ 0.68
SYNCQ9H7C4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 REXO1L9P-201ENST00000604264 2108 ntBASIC19.3■□□□□ 0.68
SYNCQ9H7C4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 AC018470.1-201ENST00000624790 3129 ntBASIC19.29■□□□□ 0.68
SYNCQ9H7C4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 TMPOP1-202ENST00000424642 1267 ntBASIC19.29■□□□□ 0.68
SYNCQ9H7C4 TSPY5P-201ENST00000426936 936 ntBASIC19.29■□□□□ 0.68
SYNCQ9H7C4 PVRIG2P-201ENST00000435460 978 ntBASIC19.29■□□□□ 0.68
SYNCQ9H7C4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 AC006011.2-201ENST00000621313 1158 ntBASIC19.29■□□□□ 0.68
SYNCQ9H7C4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 PHGDH-209ENST00000641074 1780 ntBASIC19.29■□□□□ 0.68
SYNCQ9H7C4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNCQ9H7C4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 RCN1P1-201ENST00000400413 996 ntBASIC19.28■□□□□ 0.68
SYNCQ9H7C4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 KRT18P21-201ENST00000515767 1272 ntBASIC19.28■□□□□ 0.68
SYNCQ9H7C4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 AL024508.2-201ENST00000607749 1894 ntBASIC19.28■□□□□ 0.68
SYNCQ9H7C4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.28■□□□□ 0.68
SYNCQ9H7C4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
SYNCQ9H7C4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCQ9H7C4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SYNCQ9H7C4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCQ9H7C4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCQ9H7C4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNCQ9H7C4 LTB4R2-202ENST00000528054 3092 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms