Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 IER3-202ENST00000376377 1350 ntBASIC16.78■□□□□ 0.28
UBQLN3Q9H347 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 AL391807.1-203ENST00000604392 2365 ntBASIC16.78■□□□□ 0.28
UBQLN3Q9H347 MYLKP1-201ENST00000509077 1580 ntBASIC16.78■□□□□ 0.28
UBQLN3Q9H347 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 AL136038.4-201ENST00000603606 1261 ntBASIC16.78■□□□□ 0.28
UBQLN3Q9H347 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.78■□□□□ 0.28
UBQLN3Q9H347 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UBQLN3Q9H347 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 ESPNP-201ENST00000270691 2015 ntBASIC16.77■□□□□ 0.28
UBQLN3Q9H347 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBQLN3Q9H347 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 BCL2-203ENST00000589955 5011 ntBASIC16.77■□□□□ 0.27
UBQLN3Q9H347 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBQLN3Q9H347 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 PVRIG2P-201ENST00000435460 978 ntBASIC16.76■□□□□ 0.27
UBQLN3Q9H347 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms