Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MTMR9LP-203ENST00000426597 1545 ntBASIC20.16■□□□□ 0.82
RNF39Q9H2S5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 Z98044.1-201ENST00000632503 1764 ntBASIC20.16■□□□□ 0.82
RNF39Q9H2S5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RNF39Q9H2S5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 MIR662-201ENST00000384847 95 ntBASIC20.15■□□□□ 0.82
RNF39Q9H2S5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 KIZ-AS1-202ENST00000443753 1161 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 DNAJB3-202ENST00000449667 1266 ntBASIC20.15■□□□□ 0.82
RNF39Q9H2S5 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 NPAP1P7-201ENST00000613027 823 ntBASIC20.15■□□□□ 0.82
RNF39Q9H2S5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF39Q9H2S5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
RNF39Q9H2S5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF39Q9H2S5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF39Q9H2S5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 WFDC13-201ENST00000305479 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AC016734.2-201ENST00000624325 1377 ntBASIC20.14■□□□□ 0.81
RNF39Q9H2S5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AC234781.2-201ENST00000426370 994 ntBASIC20.14■□□□□ 0.81
RNF39Q9H2S5 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 RAB28P2-201ENST00000454299 641 ntBASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AP000547.1-201ENST00000454360 617 ntBASIC20.14■□□□□ 0.81
RNF39Q9H2S5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 RNF126P1-202ENST00000569893 925 ntBASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AC064872.1-201ENST00000604823 1072 ntBASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF39Q9H2S5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 AC010460.3-201ENST00000511359 1579 ntBASIC20.13■□□□□ 0.81
RNF39Q9H2S5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 AC087235.1-201ENST00000538297 1329 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 ATP5G2P1-201ENST00000433580 426 ntBASIC20.13■□□□□ 0.81
RNF39Q9H2S5 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 RNU5A-4P-201ENST00000516588 111 ntBASIC20.13■□□□□ 0.81
RNF39Q9H2S5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms