Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 AP000523.1-201ENST00000398242 1049 ntBASIC16.67■□□□□ 0.26
TRIM2Q9C040 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 SEC1P-202ENST00000473944 940 ntBASIC16.67■□□□□ 0.26
TRIM2Q9C040 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM2Q9C040 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TRIM2Q9C040 LINC01126-201ENST00000623515 1646 ntBASIC16.67■□□□□ 0.26
TRIM2Q9C040 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 GNAS-203ENST00000306120 1878 ntBASIC16.66■□□□□ 0.26
TRIM2Q9C040 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 AL049597.2-201ENST00000565575 961 ntBASIC16.66■□□□□ 0.26
TRIM2Q9C040 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 AC008687.5-201ENST00000593746 558 ntBASIC16.66■□□□□ 0.26
TRIM2Q9C040 AL024508.2-201ENST00000607749 1894 ntBASIC16.66■□□□□ 0.26
TRIM2Q9C040 AC024243.1-201ENST00000609234 778 ntBASIC16.66■□□□□ 0.26
TRIM2Q9C040 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM2Q9C040 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM2Q9C040 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 NFIC-211ENST00000641145 8399 ntBASIC16.65■□□□□ 0.26
TRIM2Q9C040 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 AL445228.2-201ENST00000605589 952 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms