Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEM47Q9BQJ4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 NUS1P2-201ENST00000417358 873 ntBASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 POM121L3P-201ENST00000419331 1163 ntBASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 KRT8P47-201ENST00000604727 1398 ntBASIC20.97■□□□□ 0.95
TMEM47Q9BQJ4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 AC096582.2-201ENST00000510860 516 ntBASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 AC111152.3-201ENST00000569699 673 ntBASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 RN7SL510P-201ENST00000581311 263 ntBASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM47Q9BQJ4 TP73-AS1-210ENST00000637775 1455 ntBASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 RCN1P2-201ENST00000398357 915 ntBASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 KRT16P4-201ENST00000453883 522 ntBASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.95■□□□□ 0.94
TMEM47Q9BQJ4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM47Q9BQJ4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM47Q9BQJ4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TMEM47Q9BQJ4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM47Q9BQJ4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TMEM47Q9BQJ4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms