Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 FP475955.4-201ENST00000623131 1990 ntBASIC20.59■□□□□ 0.89
ARID3AQ99856 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.59■□□□□ 0.89
ARID3AQ99856 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ARID3AQ99856 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARID3AQ99856 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARID3AQ99856 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARID3AQ99856 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ARID3AQ99856 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARID3AQ99856 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
ARID3AQ99856 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARID3AQ99856 ESPNP-201ENST00000270691 2015 ntBASIC20.58■□□□□ 0.89
ARID3AQ99856 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ARID3AQ99856 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.58■□□□□ 0.89
ARID3AQ99856 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.58■□□□□ 0.89
ARID3AQ99856 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARID3AQ99856 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.58■□□□□ 0.89
ARID3AQ99856 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.58■□□□□ 0.89
ARID3AQ99856 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARID3AQ99856 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARID3AQ99856 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.58■□□□□ 0.89
ARID3AQ99856 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.58■□□□□ 0.89
ARID3AQ99856 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.58■□□□□ 0.89
ARID3AQ99856 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARID3AQ99856 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARID3AQ99856 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.58■□□□□ 0.88
ARID3AQ99856 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.58■□□□□ 0.88
ARID3AQ99856 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.58■□□□□ 0.88
ARID3AQ99856 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARID3AQ99856 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARID3AQ99856 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.58■□□□□ 0.88
ARID3AQ99856 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARID3AQ99856 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARID3AQ99856 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.57■□□□□ 0.88
ARID3AQ99856 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.57■□□□□ 0.88
ARID3AQ99856 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ARID3AQ99856 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.57■□□□□ 0.88
ARID3AQ99856 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ARID3AQ99856 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 AC008040.2-201ENST00000461049 708 ntBASIC20.57■□□□□ 0.88
ARID3AQ99856 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.57■□□□□ 0.88
ARID3AQ99856 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 RCC2P6-201ENST00000526625 1557 ntBASIC20.57■□□□□ 0.88
ARID3AQ99856 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
ARID3AQ99856 AC131212.4-201ENST00000623606 975 ntBASIC20.57■□□□□ 0.88
ARID3AQ99856 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.57■□□□□ 0.88
ARID3AQ99856 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARID3AQ99856 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.56■□□□□ 0.88
ARID3AQ99856 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARID3AQ99856 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.56■□□□□ 0.88
ARID3AQ99856 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
ARID3AQ99856 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.56■□□□□ 0.88
ARID3AQ99856 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
ARID3AQ99856 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.56■□□□□ 0.88
ARID3AQ99856 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ARID3AQ99856 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ARID3AQ99856 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.56■□□□□ 0.88
ARID3AQ99856 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.56■□□□□ 0.88
ARID3AQ99856 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARID3AQ99856 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ARID3AQ99856 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.56■□□□□ 0.88
ARID3AQ99856 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARID3AQ99856 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.56■□□□□ 0.88
ARID3AQ99856 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms