Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 AL441883.1-201ENST00000566170 1045 ntBASIC16.8■□□□□ 0.28
TM9SF2Q99805 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 MIR4674-201ENST00000582457 87 ntBASIC16.8■□□□□ 0.28
TM9SF2Q99805 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 CR769767.2-201ENST00000622735 460 ntBASIC16.8■□□□□ 0.28
TM9SF2Q99805 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 MYC-208ENST00000641036 567 ntBASIC16.8■□□□□ 0.28
TM9SF2Q99805 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 ESPNP-201ENST00000270691 2015 ntBASIC16.8■□□□□ 0.28
TM9SF2Q99805 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TM9SF2Q99805 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM9SF2Q99805 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 MCCD1P1-208ENST00000445732 328 ntBASIC16.79■□□□□ 0.28
TM9SF2Q99805 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 AC091076.1-201ENST00000610741 619 ntBASIC16.79■□□□□ 0.28
TM9SF2Q99805 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM9SF2Q99805 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.79■□□□□ 0.28
TM9SF2Q99805 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms