Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC108751.1-201ENST00000490852 363 ntBASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 SNHG9-202ENST00000564014 471 ntBASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NECTIN4Q96NY8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 METTL21AP1-201ENST00000438852 635 ntBASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 PRYP5-201ENST00000451909 266 ntBASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 AC136632.2-201ENST00000512891 861 ntBASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 MIR3197-201ENST00000582241 73 ntBASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 AC073592.4-201ENST00000623827 446 ntBASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 AC002310.6-201ENST00000624451 1377 ntBASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NECTIN4Q96NY8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 BX005266.1-201ENST00000473402 457 ntBASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 YBX1P5-201ENST00000509441 847 ntBASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 AL596442.2-201ENST00000610240 980 ntBASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NECTIN4Q96NY8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
NECTIN4Q96NY8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 AC087289.5-201ENST00000586076 3175 ntBASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 AC254562.1-201ENST00000417586 456 ntBASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms