Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 MTCL1P1-201ENST00000446207 792 ntBASIC15.29■□□□□ 0.04
SPG11Q96JI7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 MIR4469-201ENST00000583919 79 ntBASIC15.29■□□□□ 0.04
SPG11Q96JI7 AC012645.4-201ENST00000610691 1061 ntBASIC15.29■□□□□ 0.04
SPG11Q96JI7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 HCG4B-203ENST00000450128 991 ntBASIC15.29■□□□□ 0.04
SPG11Q96JI7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SPG11Q96JI7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPG11Q96JI7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 AL049812.1-201ENST00000432563 2267 ntBASIC15.28■□□□□ 0.04
SPG11Q96JI7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 AC093028.1-201ENST00000622998 982 ntBASIC15.28■□□□□ 0.04
SPG11Q96JI7 AL035252.4-201ENST00000624174 288 ntBASIC15.28■□□□□ 0.04
SPG11Q96JI7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.28■□□□□ 0.04
SPG11Q96JI7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPG11Q96JI7 SIGLEC16-201ENST00000599858 1437 ntBASIC15.27■□□□□ 0.04
SPG11Q96JI7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.27■□□□□ 0.04
SPG11Q96JI7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.27■□□□□ 0.04
SPG11Q96JI7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms