Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.51■□□□□ 0.71
LRCH3Q96II8 AC068472.1-201ENST00000474589 881 ntBASIC19.51■□□□□ 0.71
LRCH3Q96II8 AC093520.2-201ENST00000561830 333 ntBASIC19.51■□□□□ 0.71
LRCH3Q96II8 PDPK2P-202ENST00000562415 1191 ntBASIC19.51■□□□□ 0.71
LRCH3Q96II8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.51■□□□□ 0.71
LRCH3Q96II8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.51■□□□□ 0.71
LRCH3Q96II8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LRCH3Q96II8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH3Q96II8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRCH3Q96II8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 AC073621.1-201ENST00000392730 636 ntBASIC19.5■□□□□ 0.71
LRCH3Q96II8 CRYGEP-201ENST00000412192 528 ntBASIC19.5■□□□□ 0.71
LRCH3Q96II8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 TERF1P3-201ENST00000505638 1227 ntBASIC19.5■□□□□ 0.71
LRCH3Q96II8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 AL606495.2-201ENST00000605867 535 ntBASIC19.5■□□□□ 0.71
LRCH3Q96II8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 PGM5P2-202ENST00000637225 1043 ntBASIC19.5■□□□□ 0.71
LRCH3Q96II8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH3Q96II8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 AC116562.4-201ENST00000641316 2276 ntBASIC19.5■□□□□ 0.71
LRCH3Q96II8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRCH3Q96II8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 AC093214.1-201ENST00000511688 1107 ntBASIC19.49■□□□□ 0.71
LRCH3Q96II8 AC109322.1-201ENST00000524499 1264 ntBASIC19.49■□□□□ 0.71
LRCH3Q96II8 AC025678.2-201ENST00000562061 970 ntBASIC19.49■□□□□ 0.71
LRCH3Q96II8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH3Q96II8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LRCH3Q96II8 AL158211.5-201ENST00000623583 2518 ntBASIC19.49■□□□□ 0.71
LRCH3Q96II8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.48■□□□□ 0.71
LRCH3Q96II8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 AC002472.2-201ENST00000442739 958 ntBASIC19.48■□□□□ 0.71
LRCH3Q96II8 BX005266.1-201ENST00000473402 457 ntBASIC19.48■□□□□ 0.71
LRCH3Q96II8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 RNA5SP421-201ENST00000516864 134 ntBASIC19.48■□□□□ 0.71
LRCH3Q96II8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.48■□□□□ 0.71
LRCH3Q96II8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms