Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.05■□□□□ 0.8
HPS3Q969F9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.05■□□□□ 0.8
HPS3Q969F9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.05■□□□□ 0.8
HPS3Q969F9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
HPS3Q969F9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS3Q969F9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.05■□□□□ 0.8
HPS3Q969F9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HPS3Q969F9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.04■□□□□ 0.8
HPS3Q969F9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 HBZP1-201ENST00000354915 429 ntBASIC20.04■□□□□ 0.8
HPS3Q969F9 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS3Q969F9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HPS3Q969F9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.04■□□□□ 0.8
HPS3Q969F9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS3Q969F9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.04■□□□□ 0.8
HPS3Q969F9 AC024563.2-201ENST00000603282 481 ntBASIC20.04■□□□□ 0.8
HPS3Q969F9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HPS3Q969F9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS3Q969F9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HPS3Q969F9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS3Q969F9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.03■□□□□ 0.8
HPS3Q969F9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
HPS3Q969F9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HPS3Q969F9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HPS3Q969F9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS3Q969F9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.03■□□□□ 0.8
HPS3Q969F9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.03■□□□□ 0.8
HPS3Q969F9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.03■□□□□ 0.8
HPS3Q969F9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.03■□□□□ 0.8
HPS3Q969F9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HPS3Q969F9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
HPS3Q969F9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HPS3Q969F9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS3Q969F9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
HPS3Q969F9 LETM1P2-201ENST00000597330 2178 ntBASIC20.02■□□□□ 0.8
HPS3Q969F9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.02■□□□□ 0.8
HPS3Q969F9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.02■□□□□ 0.8
HPS3Q969F9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.02■□□□□ 0.8
HPS3Q969F9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.02■□□□□ 0.8
HPS3Q969F9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HPS3Q969F9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.02■□□□□ 0.8
HPS3Q969F9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HPS3Q969F9 AC092647.4-201ENST00000457211 535 ntBASIC20.02■□□□□ 0.8
HPS3Q969F9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 AC022616.7-201ENST00000525383 220 ntBASIC20.02■□□□□ 0.8
HPS3Q969F9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.02■□□□□ 0.8
HPS3Q969F9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.02■□□□□ 0.8
HPS3Q969F9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.02■□□□□ 0.8
HPS3Q969F9 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.02■□□□□ 0.8
HPS3Q969F9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
HPS3Q969F9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HPS3Q969F9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS3Q969F9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms