Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 AC080080.1-201ENST00000625121 2420 ntBASIC16.26■□□□□ 0.19
PTP4A1Q93096 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 MIR1238-201ENST00000408483 83 ntBASIC16.26■□□□□ 0.19
PTP4A1Q93096 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.26■□□□□ 0.19
PTP4A1Q93096 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A1Q93096 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 MMP23A-201ENST00000234610 1017 ntBASIC16.25■□□□□ 0.19
PTP4A1Q93096 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 SLC25A1P2-201ENST00000430693 912 ntBASIC16.25■□□□□ 0.19
PTP4A1Q93096 TSPY17P-201ENST00000450329 467 ntBASIC16.25■□□□□ 0.19
PTP4A1Q93096 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 AC104390.1-201ENST00000555663 520 ntBASIC16.25■□□□□ 0.19
PTP4A1Q93096 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTP4A1Q93096 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PTP4A1Q93096 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 PCDHA12-202ENST00000613593 2588 ntBASIC16.24■□□□□ 0.19
PTP4A1Q93096 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 C2orf69P3-201ENST00000565542 1120 ntBASIC16.24■□□□□ 0.19
PTP4A1Q93096 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
PTP4A1Q93096 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTP4A1Q93096 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms