Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 NSUN5P1-202ENST00000421140 1535 ntBASIC19.41■□□□□ 0.7
BEST2Q8NFU1 NSUN5P2-203ENST00000457352 1529 ntBASIC19.41■□□□□ 0.7
BEST2Q8NFU1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 AL096828.2-201ENST00000567259 1965 ntBASIC19.41■□□□□ 0.7
BEST2Q8NFU1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 AC135776.1-201ENST00000319817 2481 ntBASIC19.41■□□□□ 0.7
BEST2Q8NFU1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.41■□□□□ 0.7
BEST2Q8NFU1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 AC112698.1-201ENST00000510299 916 ntBASIC19.4■□□□□ 0.7
BEST2Q8NFU1 FOSL1P1-201ENST00000511041 816 ntBASIC19.4■□□□□ 0.7
BEST2Q8NFU1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST2Q8NFU1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
BEST2Q8NFU1 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.39■□□□□ 0.7
BEST2Q8NFU1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
BEST2Q8NFU1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BEST2Q8NFU1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BEST2Q8NFU1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 TSPY19P-201ENST00000418461 509 ntBASIC19.39■□□□□ 0.69
BEST2Q8NFU1 TSPY18P-201ENST00000441642 509 ntBASIC19.39■□□□□ 0.69
BEST2Q8NFU1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 UNC93B7-201ENST00000509439 705 ntBASIC19.39■□□□□ 0.69
BEST2Q8NFU1 AC138894.3-201ENST00000603787 634 ntBASIC19.39■□□□□ 0.69
BEST2Q8NFU1 AL121772.3-201ENST00000610840 674 ntBASIC19.39■□□□□ 0.69
BEST2Q8NFU1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST2Q8NFU1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST2Q8NFU1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms