Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 POU5F1P3-201ENST00000428824 1078 ntBASIC15.66■□□□□ 0.1
BEST4Q8NFU0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 PCDHB19P-201ENST00000570871 2371 ntBASIC15.66■□□□□ 0.1
BEST4Q8NFU0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 KRT8P3-201ENST00000519669 1449 ntBASIC15.66■□□□□ 0.1
BEST4Q8NFU0 AL391005.1-201ENST00000623953 2435 ntBASIC15.66■□□□□ 0.1
BEST4Q8NFU0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 LINC00602-201ENST00000629776 2065 ntBASIC15.66■□□□□ 0.1
BEST4Q8NFU0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST4Q8NFU0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 UNC93B4-201ENST00000505679 747 ntBASIC15.65■□□□□ 0.1
BEST4Q8NFU0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST4Q8NFU0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.64■□□□□ 0.09
BEST4Q8NFU0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 KRT8P11-201ENST00000409686 1436 ntBASIC15.64■□□□□ 0.09
BEST4Q8NFU0 POM121L13P-201ENST00000422362 380 ntBASIC15.64■□□□□ 0.09
BEST4Q8NFU0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
BEST4Q8NFU0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms