Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNEP1R1Q8N9A8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 NUS1P2-201ENST00000417358 873 ntBASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 CROCCP3-202ENST00000420820 1947 ntBASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNEP1R1Q8N9A8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 TSPY19P-201ENST00000418461 509 ntBASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 AC026396.1-201ENST00000419388 421 ntBASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 AC246785.2-201ENST00000432512 513 ntBASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 TSPY18P-201ENST00000441642 509 ntBASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 AC091607.1-201ENST00000490318 1060 ntBASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 KRT18P31-201ENST00000506277 1292 ntBASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 UNC93B7-201ENST00000509439 705 ntBASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.04■□□□□ 0.16
CNEP1R1Q8N9A8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 AC087289.5-201ENST00000586076 3175 ntBASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 AP005901.3-202ENST00000581653 237 ntBASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CNEP1R1Q8N9A8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms