Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 AL163051.1-201ENST00000569214 1512 ntBASIC18.59■□□□□ 0.57
PAF1Q8N7H5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PAF1Q8N7H5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 AC009102.3-201ENST00000623118 1491 ntBASIC18.58■□□□□ 0.57
PAF1Q8N7H5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PAF1Q8N7H5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 MIR3180-4-201ENST00000582223 153 ntBASIC18.58■□□□□ 0.56
PAF1Q8N7H5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 AL136038.4-201ENST00000603606 1261 ntBASIC18.58■□□□□ 0.56
PAF1Q8N7H5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PAF1Q8N7H5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 KRT18P41-201ENST00000518924 1277 ntBASIC18.57■□□□□ 0.56
PAF1Q8N7H5 VENTXP5-201ENST00000523979 775 ntBASIC18.57■□□□□ 0.56
PAF1Q8N7H5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PAF1Q8N7H5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 WIZP1-201ENST00000531444 2299 ntBASIC18.56■□□□□ 0.56
PAF1Q8N7H5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 MIR149-201ENST00000384879 89 ntBASIC18.56■□□□□ 0.56
PAF1Q8N7H5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.56■□□□□ 0.56
PAF1Q8N7H5 AC092597.1-201ENST00000487352 616 ntBASIC18.56■□□□□ 0.56
PAF1Q8N7H5 ZNF444P1-201ENST00000559497 298 ntBASIC18.56■□□□□ 0.56
PAF1Q8N7H5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms