Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 AC005521.1-201ENST00000393351 872 ntBASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TTC9CQ8N5M4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 NOC2LP2-201ENST00000407594 1944 ntBASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 RASA4DP-201ENST00000460726 1199 ntBASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 AL441883.1-201ENST00000566170 1045 ntBASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 AC011558.1-201ENST00000623459 338 ntBASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TTC9CQ8N5M4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 YBX1P2-201ENST00000489612 999 ntBASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 AC139887.4-201ENST00000607877 719 ntBASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms