Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 RN7SL606P-201ENST00000472779 293 ntBASIC19.21■□□□□ 0.67
TTC39CQ8N584 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 IGHV3-41-201ENST00000613121 348 ntBASIC19.21■□□□□ 0.67
TTC39CQ8N584 AC116407.2-201ENST00000613639 860 ntBASIC19.21■□□□□ 0.67
TTC39CQ8N584 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 KRT18P55-202ENST00000578578 1546 ntBASIC19.2■□□□□ 0.66
TTC39CQ8N584 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 TSSC2-201ENST00000450217 709 ntBASIC19.2■□□□□ 0.66
TTC39CQ8N584 AC068472.1-201ENST00000474589 881 ntBASIC19.2■□□□□ 0.66
TTC39CQ8N584 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 AC069148.1-201ENST00000608741 768 ntBASIC19.2■□□□□ 0.66
TTC39CQ8N584 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39CQ8N584 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.2■□□□□ 0.66
TTC39CQ8N584 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 AC016734.2-201ENST00000624325 1377 ntBASIC19.19■□□□□ 0.66
TTC39CQ8N584 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 MTCL1P1-201ENST00000446207 792 ntBASIC19.19■□□□□ 0.66
TTC39CQ8N584 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 AC112698.1-201ENST00000510299 916 ntBASIC19.19■□□□□ 0.66
TTC39CQ8N584 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 AL592071.1-201ENST00000611956 408 ntBASIC19.19■□□□□ 0.66
TTC39CQ8N584 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39CQ8N584 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39CQ8N584 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms