Protein–RNA interactions for Protein: Q8N448

LNX2, Ligand of Numb protein X 2, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX2Q8N448 AC009065.1-201ENST00000564055 1225 ntBASIC16.41■□□□□ 0.22
LNX2Q8N448 WWOX-216ENST00000569818 525 ntBASIC16.41■□□□□ 0.22
LNX2Q8N448 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
LNX2Q8N448 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 AL023803.3-201ENST00000615559 522 ntBASIC16.41■□□□□ 0.22
LNX2Q8N448 AC113410.3-201ENST00000623366 203 ntBASIC16.41■□□□□ 0.22
LNX2Q8N448 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.41■□□□□ 0.22
LNX2Q8N448 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
LNX2Q8N448 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LNX2Q8N448 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.41■□□□□ 0.22
LNX2Q8N448 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.41■□□□□ 0.22
LNX2Q8N448 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LNX2Q8N448 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LNX2Q8N448 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LNX2Q8N448 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LNX2Q8N448 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LNX2Q8N448 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.4■□□□□ 0.22
LNX2Q8N448 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LNX2Q8N448 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.4■□□□□ 0.22
LNX2Q8N448 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.4■□□□□ 0.22
LNX2Q8N448 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.4■□□□□ 0.22
LNX2Q8N448 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.4■□□□□ 0.22
LNX2Q8N448 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.4■□□□□ 0.22
LNX2Q8N448 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.4■□□□□ 0.22
LNX2Q8N448 AC233702.5-201ENST00000584107 538 ntBASIC16.4■□□□□ 0.22
LNX2Q8N448 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LNX2Q8N448 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LNX2Q8N448 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LNX2Q8N448 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
LNX2Q8N448 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
LNX2Q8N448 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
LNX2Q8N448 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LNX2Q8N448 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LNX2Q8N448 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 SLC25A1P2-201ENST00000430693 912 ntBASIC16.39■□□□□ 0.21
LNX2Q8N448 TSPY17P-201ENST00000450329 467 ntBASIC16.39■□□□□ 0.21
LNX2Q8N448 UBE2SP1-201ENST00000450587 669 ntBASIC16.39■□□□□ 0.21
LNX2Q8N448 AP003041.3-201ENST00000527151 707 ntBASIC16.39■□□□□ 0.21
LNX2Q8N448 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.39■□□□□ 0.21
LNX2Q8N448 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.39■□□□□ 0.21
LNX2Q8N448 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 MIR3180-4-201ENST00000582223 153 ntBASIC16.39■□□□□ 0.21
LNX2Q8N448 CR769767.2-201ENST00000622735 460 ntBASIC16.39■□□□□ 0.21
LNX2Q8N448 AL049637.2-201ENST00000641778 930 ntBASIC16.39■□□□□ 0.21
LNX2Q8N448 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.39■□□□□ 0.21
LNX2Q8N448 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.39■□□□□ 0.21
LNX2Q8N448 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.39■□□□□ 0.21
LNX2Q8N448 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LNX2Q8N448 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.38■□□□□ 0.21
LNX2Q8N448 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LNX2Q8N448 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LNX2Q8N448 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LNX2Q8N448 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LNX2Q8N448 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LNX2Q8N448 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LNX2Q8N448 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms