Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TP73-AS1-207ENST00000624167 988 ntBASIC28.17■■■□□ 2.1
VPS8Q8N3P4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC28.17■■■□□ 2.1
VPS8Q8N3P4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 HLA-DQB1-201ENST00000374943 1656 ntBASIC28.16■■■□□ 2.1
VPS8Q8N3P4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 FAAHP1-202ENST00000446499 1238 ntBASIC28.16■■■□□ 2.1
VPS8Q8N3P4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 AP001269.4-201ENST00000609611 512 ntBASIC28.16■■■□□ 2.1
VPS8Q8N3P4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
VPS8Q8N3P4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 AC004870.1-201ENST00000315132 882 ntBASIC28.15■■■□□ 2.1
VPS8Q8N3P4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 AC104692.2-201ENST00000603054 253 ntBASIC28.15■■■□□ 2.1
VPS8Q8N3P4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC28.15■■■□□ 2.1
VPS8Q8N3P4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 MIR5100-201ENST00000579544 119 ntBASIC28.14■■■□□ 2.1
VPS8Q8N3P4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
VPS8Q8N3P4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC28.14■■■□□ 2.09
VPS8Q8N3P4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
VPS8Q8N3P4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
VPS8Q8N3P4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
VPS8Q8N3P4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
VPS8Q8N3P4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
VPS8Q8N3P4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 KRT18P55-202ENST00000578578 1546 ntBASIC28.13■■■□□ 2.09
VPS8Q8N3P4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
VPS8Q8N3P4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
VPS8Q8N3P4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
VPS8Q8N3P4 AC138028.4-201ENST00000564984 1845 ntBASIC28.12■■■□□ 2.09
VPS8Q8N3P4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
VPS8Q8N3P4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
VPS8Q8N3P4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC28.12■■■□□ 2.09
VPS8Q8N3P4 AF238378.1-201ENST00000526806 358 ntBASIC28.12■■■□□ 2.09
VPS8Q8N3P4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.12■■■□□ 2.09
VPS8Q8N3P4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
VPS8Q8N3P4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC28.12■■■□□ 2.09
VPS8Q8N3P4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms