Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 AC026396.1-201ENST00000419388 421 ntBASIC16.79■□□□□ 0.28
BEST3Q8N1M1 RN7SL606P-201ENST00000472779 293 ntBASIC16.79■□□□□ 0.28
BEST3Q8N1M1 UNC93B7-201ENST00000509439 705 ntBASIC16.79■□□□□ 0.28
BEST3Q8N1M1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 RN7SL510P-201ENST00000581311 263 ntBASIC16.79■□□□□ 0.28
BEST3Q8N1M1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 AL732292.2-201ENST00000609649 430 ntBASIC16.79■□□□□ 0.28
BEST3Q8N1M1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.79■□□□□ 0.28
BEST3Q8N1M1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST3Q8N1M1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 VENTXP7-201ENST00000475503 772 ntBASIC16.78■□□□□ 0.28
BEST3Q8N1M1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 AC008687.5-201ENST00000593746 558 ntBASIC16.78■□□□□ 0.28
BEST3Q8N1M1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 AC138894.3-201ENST00000603787 634 ntBASIC16.78■□□□□ 0.28
BEST3Q8N1M1 IFNL4P1-201ENST00000607083 540 ntBASIC16.78■□□□□ 0.28
BEST3Q8N1M1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST3Q8N1M1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 TSPY19P-201ENST00000418461 509 ntBASIC16.77■□□□□ 0.28
BEST3Q8N1M1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 TSPY18P-201ENST00000441642 509 ntBASIC16.77■□□□□ 0.28
BEST3Q8N1M1 KRT17P6-201ENST00000453795 1220 ntBASIC16.77■□□□□ 0.28
BEST3Q8N1M1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms