Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 ADH5P3-201ENST00000433842 1137 ntBASIC24.96■■□□□ 1.59
XRN1Q8IZH2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
XRN1Q8IZH2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
XRN1Q8IZH2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
XRN1Q8IZH2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC24.95■■□□□ 1.59
XRN1Q8IZH2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC24.95■■□□□ 1.59
XRN1Q8IZH2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC24.95■■□□□ 1.59
XRN1Q8IZH2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 CD82-202ENST00000342935 967 ntTSL 5 BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 STOM-202ENST00000347359 870 ntTSL 2 BASIC24.95■■□□□ 1.58
XRN1Q8IZH2 AL031432.2-201ENST00000566714 459 ntBASIC24.95■■□□□ 1.58
XRN1Q8IZH2 AL928711.1-201ENST00000570165 459 ntBASIC24.95■■□□□ 1.58
XRN1Q8IZH2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 AC005082.1-201ENST00000413042 2259 ntBASIC24.94■■□□□ 1.58
XRN1Q8IZH2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 AC011467.4-201ENST00000594891 528 ntBASIC24.94■■□□□ 1.58
XRN1Q8IZH2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
XRN1Q8IZH2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 AC106028.4-201ENST00000614509 607 ntBASIC24.93■■□□□ 1.58
XRN1Q8IZH2 AC093028.1-201ENST00000622998 982 ntBASIC24.93■■□□□ 1.58
XRN1Q8IZH2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 AC132938.5-201ENST00000624980 1813 ntBASIC24.93■■□□□ 1.58
XRN1Q8IZH2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
XRN1Q8IZH2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 ANO7L1-203ENST00000602586 1720 ntBASIC24.92■■□□□ 1.58
XRN1Q8IZH2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC24.92■■□□□ 1.58
XRN1Q8IZH2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 TBC1D3P5-201ENST00000579401 1545 ntBASIC24.91■■□□□ 1.58
XRN1Q8IZH2 AL139400.1-201ENST00000366220 510 ntBASIC24.91■■□□□ 1.58
XRN1Q8IZH2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC24.91■■□□□ 1.58
XRN1Q8IZH2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms