Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.28■□□□□ 0.36
RAB43Q86YS6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 AC068587.9-201ENST00000641814 219 ntBASIC17.28■□□□□ 0.36
RAB43Q86YS6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB43Q86YS6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB43Q86YS6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 RNF126P1-202ENST00000569893 925 ntBASIC17.27■□□□□ 0.36
RAB43Q86YS6 AC090616.6-201ENST00000582640 721 ntBASIC17.27■□□□□ 0.36
RAB43Q86YS6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB43Q86YS6 Z83836.1-201ENST00000624605 1642 ntBASIC17.27■□□□□ 0.36
RAB43Q86YS6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB43Q86YS6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB43Q86YS6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RAB43Q86YS6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB43Q86YS6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB43Q86YS6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB43Q86YS6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms