Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 AC004877.2-201ENST00000623941 599 ntBASIC22.58■■□□□ 1.21
COL23A1Q86Y22 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
COL23A1Q86Y22 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.58■■□□□ 1.2
COL23A1Q86Y22 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL23A1Q86Y22 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL23A1Q86Y22 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 RPS15P9-201ENST00000494093 319 ntBASIC22.57■■□□□ 1.2
COL23A1Q86Y22 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 AC004449.1-201ENST00000564240 433 ntBASIC22.57■■□□□ 1.2
COL23A1Q86Y22 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 AC005498.2-205ENST00000593218 784 ntBASIC22.57■■□□□ 1.2
COL23A1Q86Y22 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL23A1Q86Y22 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.56■■□□□ 1.2
COL23A1Q86Y22 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 AC096633.1-201ENST00000422446 749 ntBASIC22.56■■□□□ 1.2
COL23A1Q86Y22 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 AC073592.5-201ENST00000624854 528 ntBASIC22.56■■□□□ 1.2
COL23A1Q86Y22 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL23A1Q86Y22 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL23A1Q86Y22 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 FAM58CP-201ENST00000435741 640 ntBASIC22.54■■□□□ 1.2
COL23A1Q86Y22 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 KRT19P2-202ENST00000557173 1012 ntBASIC22.54■■□□□ 1.2
COL23A1Q86Y22 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 MIR4745-201ENST00000577608 62 ntBASIC22.54■■□□□ 1.2
COL23A1Q86Y22 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms