Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYVN1Q86TM6 AC009102.3-201ENST00000623118 1491 ntBASIC17.81■□□□□ 0.44
SYVN1Q86TM6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYVN1Q86TM6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.81■□□□□ 0.44
SYVN1Q86TM6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SYVN1Q86TM6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SYVN1Q86TM6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYVN1Q86TM6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SYVN1Q86TM6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 MIR149-201ENST00000384879 89 ntBASIC17.8■□□□□ 0.44
SYVN1Q86TM6 STARP1-201ENST00000397973 869 ntBASIC17.8■□□□□ 0.44
SYVN1Q86TM6 KRT18P38-201ENST00000449496 1282 ntBASIC17.8■□□□□ 0.44
SYVN1Q86TM6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 CR769767.2-201ENST00000622735 460 ntBASIC17.8■□□□□ 0.44
SYVN1Q86TM6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 HOXB1-202ENST00000577092 1414 ntBASIC17.8■□□□□ 0.44
SYVN1Q86TM6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYVN1Q86TM6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 AC005332.1-201ENST00000577698 1310 ntBASIC17.79■□□□□ 0.44
SYVN1Q86TM6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 KRT18P23-201ENST00000435622 1283 ntBASIC17.79■□□□□ 0.44
SYVN1Q86TM6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 KRT18P56-201ENST00000507275 550 ntBASIC17.79■□□□□ 0.44
SYVN1Q86TM6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 GNAS-203ENST00000306120 1878 ntBASIC17.79■□□□□ 0.44
SYVN1Q86TM6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.79■□□□□ 0.44
SYVN1Q86TM6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 AC112907.2-201ENST00000448639 330 ntBASIC17.78■□□□□ 0.44
SYVN1Q86TM6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 VENTXP5-201ENST00000523979 775 ntBASIC17.78■□□□□ 0.44
SYVN1Q86TM6 AL136038.3-201ENST00000561909 1096 ntBASIC17.78■□□□□ 0.44
SYVN1Q86TM6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 AC116407.4-201ENST00000623319 1061 ntBASIC17.78■□□□□ 0.44
SYVN1Q86TM6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYVN1Q86TM6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms