Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
USP45Q70EL2 ATP5G2P1-201ENST00000433580 426 ntBASIC18.12■□□□□ 0.49
USP45Q70EL2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.12■□□□□ 0.49
USP45Q70EL2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.12■□□□□ 0.49
USP45Q70EL2 AL592071.1-201ENST00000611956 408 ntBASIC18.12■□□□□ 0.49
USP45Q70EL2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 KRT18P1-202ENST00000452408 1331 ntBASIC18.12■□□□□ 0.49
USP45Q70EL2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.12■□□□□ 0.49
USP45Q70EL2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
USP45Q70EL2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 AC132938.6-201ENST00000623828 1655 ntBASIC18.12■□□□□ 0.49
USP45Q70EL2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.12■□□□□ 0.49
USP45Q70EL2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP45Q70EL2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.12■□□□□ 0.49
USP45Q70EL2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
USP45Q70EL2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.11■□□□□ 0.49
USP45Q70EL2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
USP45Q70EL2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
USP45Q70EL2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
USP45Q70EL2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP45Q70EL2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.11■□□□□ 0.49
USP45Q70EL2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.11■□□□□ 0.49
USP45Q70EL2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.11■□□□□ 0.49
USP45Q70EL2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP45Q70EL2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.1■□□□□ 0.49
USP45Q70EL2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP45Q70EL2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP45Q70EL2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP45Q70EL2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.1■□□□□ 0.49
USP45Q70EL2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.1■□□□□ 0.49
USP45Q70EL2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.1■□□□□ 0.49
USP45Q70EL2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP45Q70EL2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.1■□□□□ 0.49
USP45Q70EL2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.1■□□□□ 0.49
USP45Q70EL2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.1■□□□□ 0.49
USP45Q70EL2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.1■□□□□ 0.49
USP45Q70EL2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.1■□□□□ 0.49
USP45Q70EL2 AP002414.4-201ENST00000589764 1148 ntBASIC18.1■□□□□ 0.49
USP45Q70EL2 NPAP1P7-201ENST00000613027 823 ntBASIC18.1■□□□□ 0.49
USP45Q70EL2 AC124864.1-201ENST00000623408 392 ntBASIC18.1■□□□□ 0.49
USP45Q70EL2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP45Q70EL2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.1■□□□□ 0.49
USP45Q70EL2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.1■□□□□ 0.49
USP45Q70EL2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP45Q70EL2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.1■□□□□ 0.49
USP45Q70EL2 BICD1-207ENST00000551848 1962 ntBASIC18.1■□□□□ 0.49
USP45Q70EL2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP45Q70EL2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP45Q70EL2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP45Q70EL2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP45Q70EL2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
USP45Q70EL2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP45Q70EL2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP45Q70EL2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
USP45Q70EL2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP45Q70EL2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
USP45Q70EL2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP45Q70EL2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP45Q70EL2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP45Q70EL2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms