Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 AC091607.1-201ENST00000490318 1060 ntBASIC16.33■□□□□ 0.2
RTL6Q6ICC9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 AP005901.3-202ENST00000581653 237 ntBASIC16.33■□□□□ 0.2
RTL6Q6ICC9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 Z69720.1-201ENST00000601483 472 ntBASIC16.33■□□□□ 0.2
RTL6Q6ICC9 AC138894.3-201ENST00000603787 634 ntBASIC16.33■□□□□ 0.2
RTL6Q6ICC9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL6Q6ICC9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 KRT8P10-201ENST00000450021 1447 ntBASIC16.32■□□□□ 0.2
RTL6Q6ICC9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 AC099336.1-202ENST00000602961 463 ntBASIC16.32■□□□□ 0.2
RTL6Q6ICC9 AC104692.2-201ENST00000603054 253 ntBASIC16.32■□□□□ 0.2
RTL6Q6ICC9 AC004263.2-201ENST00000617183 678 ntBASIC16.32■□□□□ 0.2
RTL6Q6ICC9 AL031008.1-201ENST00000619963 541 ntBASIC16.32■□□□□ 0.2
RTL6Q6ICC9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL6Q6ICC9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.31■□□□□ 0.2
RTL6Q6ICC9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms