Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 RASA4DP-201ENST00000460726 1199 ntBASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 AC139887.4-201ENST00000607877 719 ntBASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 AC011558.1-201ENST00000623459 338 ntBASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2AA3Q6FI13 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 AL441883.1-201ENST00000566170 1045 ntBASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 AC018470.1-201ENST00000624790 3129 ntBASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 AC093010.1-201ENST00000473625 1624 ntBASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H2AA3Q6FI13 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 AC073508.3-201ENST00000619697 1419 ntBASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 FAM8A6P-201ENST00000407496 1135 ntBASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 SLC25A6P5-201ENST00000435663 894 ntBASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 YBX1P2-201ENST00000489612 999 ntBASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST2H2AA3Q6FI13 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H2AA3Q6FI13 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms