Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TPGS2Q68CL5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPGS2Q68CL5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPGS2Q68CL5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 SART3-203ENST00000546611 1184 ntBASIC18.86■□□□□ 0.61
TPGS2Q68CL5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AC021087.4-201ENST00000563761 564 ntBASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AF228730.7-201ENST00000641842 219 ntBASIC18.86■□□□□ 0.61
TPGS2Q68CL5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPGS2Q68CL5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AC243591.1-201ENST00000452967 1364 ntBASIC18.85■□□□□ 0.61
TPGS2Q68CL5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AC120498.9-201ENST00000339021 3867 ntBASIC18.85■□□□□ 0.61
TPGS2Q68CL5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 PMS2P1-201ENST00000431037 1228 ntBASIC18.85■□□□□ 0.61
TPGS2Q68CL5 HNRNPDP1-201ENST00000439535 754 ntBASIC18.85■□□□□ 0.61
TPGS2Q68CL5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AC122714.2-201ENST00000502787 707 ntBASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 MIR7706-201ENST00000613747 67 ntBASIC18.85■□□□□ 0.61
TPGS2Q68CL5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AP000867.4-201ENST00000641616 219 ntBASIC18.85■□□□□ 0.61
TPGS2Q68CL5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.85■□□□□ 0.61
TPGS2Q68CL5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.84■□□□□ 0.61
TPGS2Q68CL5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPGS2Q68CL5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.83■□□□□ 0.61
TPGS2Q68CL5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPGS2Q68CL5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPGS2Q68CL5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.83■□□□□ 0.61
TPGS2Q68CL5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TPGS2Q68CL5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TPGS2Q68CL5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.83■□□□□ 0.6
TPGS2Q68CL5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.83■□□□□ 0.6
TPGS2Q68CL5 AL049840.3-201ENST00000602669 611 ntBASIC18.83■□□□□ 0.6
TPGS2Q68CL5 AL671883.3-201ENST00000603274 991 ntBASIC18.83■□□□□ 0.6
TPGS2Q68CL5 AC023511.2-201ENST00000618803 211 ntBASIC18.83■□□□□ 0.6
TPGS2Q68CL5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TPGS2Q68CL5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms