Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.47■□□□□ 0.39
RNF220Q5VTB9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 LINC02199-201ENST00000506655 2702 ntBASIC17.47■□□□□ 0.39
RNF220Q5VTB9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RNF220Q5VTB9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 PRSS44-201ENST00000515154 1146 ntBASIC17.46■□□□□ 0.39
RNF220Q5VTB9 RPPH1-201ENST00000516869 333 ntBASIC17.46■□□□□ 0.39
RNF220Q5VTB9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 AC026271.3-201ENST00000571884 352 ntBASIC17.46■□□□□ 0.39
RNF220Q5VTB9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 HYMAI-201ENST00000635591 3347 ntBASIC17.46■□□□□ 0.39
RNF220Q5VTB9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF220Q5VTB9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.46■□□□□ 0.38
RNF220Q5VTB9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RNF220Q5VTB9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 AC138028.4-201ENST00000564984 1845 ntBASIC17.45■□□□□ 0.38
RNF220Q5VTB9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 RARRES2P10-201ENST00000564312 460 ntBASIC17.45■□□□□ 0.38
RNF220Q5VTB9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 KRT8P11-201ENST00000409686 1436 ntBASIC17.45■□□□□ 0.38
RNF220Q5VTB9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 OR6D1P-202ENST00000641007 5290 ntBASIC17.45■□□□□ 0.38
RNF220Q5VTB9 DOC2GP-204ENST00000639052 2548 ntBASIC17.45■□□□□ 0.38
RNF220Q5VTB9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF220Q5VTB9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF220Q5VTB9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms