Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VARS2Q5ST30 AC117500.6-201ENST00000624871 588 ntBASIC19.1■□□□□ 0.65
VARS2Q5ST30 BX323043.1-201ENST00000641006 1765 ntBASIC19.1■□□□□ 0.65
VARS2Q5ST30 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VARS2Q5ST30 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARS2Q5ST30 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARS2Q5ST30 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARS2Q5ST30 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARS2Q5ST30 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARS2Q5ST30 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 AP001269.4-201ENST00000609611 512 ntBASIC19.09■□□□□ 0.65
VARS2Q5ST30 AL355877.3-201ENST00000622820 899 ntBASIC19.09■□□□□ 0.65
VARS2Q5ST30 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARS2Q5ST30 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARS2Q5ST30 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VARS2Q5ST30 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
VARS2Q5ST30 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
VARS2Q5ST30 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VARS2Q5ST30 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.08■□□□□ 0.65
VARS2Q5ST30 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
VARS2Q5ST30 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.08■□□□□ 0.65
VARS2Q5ST30 AL020996.1-203ENST00000536896 2307 ntBASIC19.08■□□□□ 0.65
VARS2Q5ST30 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VARS2Q5ST30 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VARS2Q5ST30 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VARS2Q5ST30 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VARS2Q5ST30 AC087289.5-201ENST00000586076 3175 ntBASIC19.08■□□□□ 0.65
VARS2Q5ST30 AC093010.1-201ENST00000473625 1624 ntBASIC19.08■□□□□ 0.65
VARS2Q5ST30 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VARS2Q5ST30 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.08■□□□□ 0.65
VARS2Q5ST30 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VARS2Q5ST30 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VARS2Q5ST30 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.08■□□□□ 0.64
VARS2Q5ST30 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 RBM17P3-201ENST00000417687 1192 ntBASIC19.07■□□□□ 0.64
VARS2Q5ST30 KRT18P67-201ENST00000432816 1264 ntBASIC19.07■□□□□ 0.64
VARS2Q5ST30 FGFR3P6-201ENST00000457012 610 ntBASIC19.07■□□□□ 0.64
VARS2Q5ST30 RNA5SP419-201ENST00000515908 135 ntBASIC19.07■□□□□ 0.64
VARS2Q5ST30 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 MTDHP3-201ENST00000594186 672 ntBASIC19.07■□□□□ 0.64
VARS2Q5ST30 AL773604.1-201ENST00000617417 272 ntBASIC19.07■□□□□ 0.64
VARS2Q5ST30 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.07■□□□□ 0.64
VARS2Q5ST30 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms