Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSL3PQ5NE16 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSL3PQ5NE16 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTSL3PQ5NE16 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTSL3PQ5NE16 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSL3PQ5NE16 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSL3PQ5NE16 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSL3PQ5NE16 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 AC012317.2-201ENST00000623305 2251 ntBASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTSL3PQ5NE16 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 AC006116.8-202ENST00000587620 1550 ntBASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.82■□□□□ 0.44
CTSL3PQ5NE16 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 IGHGP-201ENST00000390555 1178 ntBASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 ZNF444P1-201ENST00000559497 298 ntBASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CTSL3PQ5NE16 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 GNAS-203ENST00000306120 1878 ntBASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms